The detailed information of tRNA gene sequence


Sequence ID>WENV170689897
Genome IDLFRM01316727
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3010
End posion on genome 3085
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
catcccaaat
tRNA gene sequence 
GCCCAGGTAGCTCAGTAGGTAGAGCAGAGGACTGAAAATCCTCGTGTCGGTGGTTCGATT
CCGCCCCTGGGCACCA
Downstream region at tRNA end position 
aaatataatt
Secondary structure (Cloverleaf model)
>WENV170689897	Phe	GAA
                   t      ACCA aaatataatt
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T T
                    T     C C G C C     A
      T G A        A      | | + | |     G
    A       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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