The detailed information of tRNA gene sequence


Sequence ID>WENV170689898
Genome IDLFRM01316727
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3104
End posion on genome 3178
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
ttgaattcgt
tRNA gene sequence 
GCGGGAGTAGCTCAGTGGAAGAGCGTCGCCTTGCCAAGGCGAAAGTCGCGGGTTCGAATC
CCGTCTTCCGCTCCA
Downstream region at tRNA end position 
gtttacgagg
Secondary structure (Cloverleaf model)
>WENV170689898	Gly	GCC
                   t      TCCA gtttacgagg
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     A - T
                     G - C          T A
                    T     T G C C C     A
        G A        A      + | | | |     G
      T     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        A A        G     AAGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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