The detailed information of tRNA gene sequence


Sequence ID>WENV170689899
Genome IDLFRM01316727
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3187
End posion on genome 3260
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cagtttacga
tRNA gene sequence 
GGCGGCATAGCCAAGTGGTAAGGCAGAGGACTGCAAATCCTTTATCCCCAGTTCGAATCT
GGGTGTCGCCTCCA
Downstream region at tRNA end position 
ttttttatgc
Secondary structure (Cloverleaf model)
>WENV170689899	Cys	GCA
                   a      TCCA ttttttatgc
                     G - C
                     G - C
                     C - G
                     G - C
                     G + T
                     C - G
                     A - T          T A
                    T     G G G T C     A
        G A        A      | | | | |     G
      T     A C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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