The detailed information of tRNA gene sequence


Sequence ID>WENV170689901
Genome IDLFRM01316727
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2248
End posion on genome 2173
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atgactttat
tRNA gene sequence 
AGGGGCATAGCTCAATTGGTAGAGTAGCGGTCTCCAAAACCGTTGGTTGCGGGTTCGATT
CCTGCTGCCCCTGCCA
Downstream region at tRNA end position 
gcaaaacaga
Secondary structure (Cloverleaf model)
>WENV170689901	Trp	CCA
                   t      GCCA gcaaaacaga
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T T
                    T     C G T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK