The detailed information of tRNA gene sequence


Sequence ID>WENV170689916
Genome IDLFRM01317664
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 547
End posion on genome 633
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
caacggctgc
tRNA gene sequence 
GCCCGGATGGCGAAACTGGTAGACGCAAGGGACTTAAAATCCCTCGGTGGCAACACCGTG
CCGGTTCGATCCCGGCTCCGGGCACCA
Downstream region at tRNA end position 
ttcctcattt
Secondary structure (Cloverleaf model)
>WENV170689916	Leu	TAA
                   c      ACCA ttcctcattt
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          C T
                    T     C G G C C     A
      C A A        G      | | | | |     G
    T       A G C G       G C C G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGGTGGCAACACCGT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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