The detailed information of tRNA gene sequence


Sequence ID>WENV170689921
Genome IDLFRM01317930
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1159
End posion on genome 1084
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
ggcagcctct
tRNA gene sequence 
GCGCCTGTAGCTCAGCGGATAGAGTATCGGCCTCCGGAGCCGAGGGTCTGGCGTTCGAAT
CGCCACAGGCGCGCCA
Downstream region at tRNA end position 
tcaatgtcaa
Secondary structure (Cloverleaf model)
>WENV170689921	Arg	CCG
                   t      GCCA tcaatgtcaa
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     A C C G C     A
      C G A        A      | | | | |     G
    G       C T C G       T G G C G     C
    G       | | | +                 T T
    A       G A G T
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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