The detailed information of tRNA gene sequence


Sequence ID>WENV170689923
Genome IDLFRM01318048
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1577
End posion on genome 1651
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ggcgaaagaa
tRNA gene sequence 
GGCCCATTCGTCTATCGGTTAGGACGCAAGATTTTCATTCTTGAAAGAGCGGTTCGATTC
CGCTATGGGCTACTA
Downstream region at tRNA end position 
tttaattata
Secondary structure (Cloverleaf model)
>WENV170689923	Glu	TTC
                   a      ACTA tttaattata
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T T
                    T     T C G C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G C G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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