The detailed information of tRNA gene sequence


Sequence ID>WENV170690012
Genome IDLFRM01321466
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3228
End posion on genome 3155
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
acgccgcata
tRNA gene sequence 
GCGGTTGTAGTCTAGTCTGGTTAGGACTCGGGCCTTCCAAGCCCGCGACCCGGGTTCAAA
TCCCGGCAACCGCAtaa
Downstream region at tRNA end position 
aaactgtttc
Secondary structure (Cloverleaf model)
>WENV170690012	Gly	TCC
                   a      Ataa aaactgtttc
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C          T A
                    T     G G C C C     A
    C T G A        A      | | | | |     A
  T         T C T G       C C G G G     C
  G         + | | |                 T T
  G         G G A C
    T T A          T     CGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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