The detailed information of tRNA gene sequence


Sequence ID>WENV170690021
Genome IDLFRM01322134
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 54735
End posion on genome 54822
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctatcaacct
tRNA gene sequence 
GCTGAGGTAGCCAAGTGGACTACGGCGCCGGTCTTGAGAACCGGTAGCGCTTCGCGCTGC
GGGAGTTCGAATCTCCCCCTCAGCGCCT
Downstream region at tRNA end position 
tttctcatgc
Secondary structure (Cloverleaf model)
>WENV170690021	Ser	TGA
                   t      GCCT tttctcatgc
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        A      | | | | |     G
    G       A C C G       G G G A G     C
    G         | | |                 T T
    A       C G G C
      C T A        G     TAGCGCTTCGCGCTGC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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