The detailed information of tRNA gene sequence


Sequence ID>WENV170690022
Genome IDLFRM01322134
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 128189
End posion on genome 128263
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
ataaacgact
tRNA gene sequence 
GGGCTCGTGGTCTAGATGGTTATGACGTCGCCTTGACATGGCGGAGGTCCTGAGTTCGAA
TCTCAGCGGGCCCACtc
Downstream region at tRNA end position 
aaaaattccg
Secondary structure (Cloverleaf model)
>WENV170690022	Val	GAC
                   t      ACtc aaaaattccg
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     G A C T C     A
      A G A        G      | | | | |     G
    T       T C T G       C T G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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