The detailed information of tRNA gene sequence


Sequence ID>WENV170690024
Genome IDLFRM01322134
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 128413
End posion on genome 128488
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
gcaccagagT
tRNA gene sequence 
ACATCAGTAGTGTAGCGGTTATCACCGGGCGTTGCCAACGCTCGAACCCGGGTTCGAATC
CCGGCTGATGTATCA
Downstream region at tRNA end position 
caagcctttt
Secondary structure (Cloverleaf model)
>WENV170690024	Gly	GCC
                   T      ATCA caagcctttt
                     A - T
                     C - G
                     A - T
                     T - A
                     C - G
                     A - T
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     G
    G       T G T G       C C G G G     C
    G         | | |                 T T
    T       T C A C
      T A          C     GAAC
                    G - C
                    G + T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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