The detailed information of tRNA gene sequence


Sequence ID>WENV170690070
Genome IDLFRM01324355
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 13627
End posion on genome 13701
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
agtgccaaaa
tRNA gene sequence 
GGGCGGATAGATCAGCTCGGAAGATCGCGTGATTTGCAATCACGAGGCCGCGGGTTCAAA
TCCCGCTCCGTCCACtc
Downstream region at tRNA end position 
ccttcaccga
Secondary structure (Cloverleaf model)
>WENV170690070	Ala	TGC
                   a      ACtc ccttcaccga
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     G - C
                     A - T          T A
                    T     C G C C C     A
      C G A        A      | | | | |     A
    T       C T A G       G C G G G     C
    C       | | | |                 T T
    G       G A T C
      G A A        G     AGGCC
                    C - G
                    G - C
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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