The detailed information of tRNA gene sequence


Sequence ID>WENV170690096
Genome IDLFRM01325596
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 842
End posion on genome 916
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
gttggggcat
tRNA gene sequence 
TCCTCGATAGCTCAACGGTAGAGCATCCGGCTGTTAACCGGAGGGTTGTAGGTTCGAATC
CTACTCGGGGAGCCA
Downstream region at tRNA end position 
tttagctaac
Secondary structure (Cloverleaf model)
>WENV170690096	Asn	GTT
                   t      GCCA tttagctaac
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     A - T          T A
                    T     C A T C C     A
        A A        A      | | | | |     G
      C     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTT
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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