The detailed information of tRNA gene sequence


Sequence ID>WENV170690149
Genome IDLFRM01327098
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 414
End posion on genome 338
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
catcgaacag
tRNA gene sequence 
GGGCCTATAGCTCAGCTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGTGGTTCAAA
TCCACCTAGGCCCACCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170690149	Ile	GAT
                   g      ACCA nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T A
                    T     C C A C C     A
      C G A        A      | | | | |     A
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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