The detailed information of tRNA gene sequence


Sequence ID>WENV170690168
Genome IDLFRM01328257
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1797
End posion on genome 1722
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
tttttgcttt
tRNA gene sequence 
GGATCGTTAGCTCAACTGGCAGAGCACCTGACTCTTAATCAGGGGGTTACAGGTTCGATT
CCTGTACGATCCACCA
Downstream region at tRNA end position 
tttttttgtc
Secondary structure (Cloverleaf model)
>WENV170690168	Lys	CTT
                   t      ACCA tttttttgtc
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G - C
                     T - A          T T
                    T     T G T C C     A
      C A A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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