The detailed information of tRNA gene sequence


Sequence ID>WENV170690169
Genome IDLFRM01328257
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1678
End posion on genome 1603
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
tttttagtgt
tRNA gene sequence 
GGATCGTTAGCTCAACTGGCAGAGCACCTGACTCTTAATCAGGGGGTTACAGGTTCGATT
CCTGTACGATCCACCA
Downstream region at tRNA end position 
aatcatatta
Secondary structure (Cloverleaf model)
>WENV170690169	Lys	CTT
                   t      ACCA aatcatatta
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G - C
                     T - A          T T
                    T     T G T C C     A
      C A A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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