The detailed information of tRNA gene sequence


Sequence ID>WENV170690173
Genome IDLFRM01328291
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3511
End posion on genome 3435
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cccaaaagct
tRNA gene sequence 
CGGGATGTAGCACAGTTGGTTAGCGCGCCACGTTCGGGACGTGGAGGCCGGGTGTTCGAG
TCACCTCATCCCGACAA
Downstream region at tRNA end position 
aaagcgaaag
Secondary structure (Cloverleaf model)
>WENV170690173	Pro	CGG
                   t      ACAA aaagcgaaag
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T C C A C     A
      T G A        A      + | | | |     G
    T       C A C G       G G G T G     C
    G       |   | |                 T T
    G       G C G C
      T T A        G     AGGCC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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