The detailed information of tRNA gene sequence


Sequence ID>WENV170690177
Genome IDLFRM01328382
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1113
End posion on genome 1037
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caactcatat
tRNA gene sequence 
CGCGGGGTGGAGCAGTACGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAA
TCCTGCCCCCGCAACCA
Downstream region at tRNA end position 
ttttaaaaac
Secondary structure (Cloverleaf model)
>WENV170690177	Met	CAT
                   t      ACCA ttttaaaaac
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    A       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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