The detailed information of tRNA gene sequence


Sequence ID>WENV170690194
Genome IDLFRM01328981
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 543
End posion on genome 619
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gtcggtacac
tRNA gene sequence 
GGGCCTATAGCTCAGGCGGTTAGAGCGCATCCCTGATAAGGATGAGGTCGCTGGTTCAAG
TCCAGCTAGGCCCACCA
Downstream region at tRNA end position 
atgaacccct
Secondary structure (Cloverleaf model)
>WENV170690194	Ile	GAT
                   c      ACCA atgaacccct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     C G A C C     A
      G G A        A      | | | | |     A
    C       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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