The detailed information of tRNA gene sequence


Sequence ID>WENV170690195
Genome IDLFRM01329023
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1550
End posion on genome 1625
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
gggatcgtga
tRNA gene sequence 
GCGGGTGTAGCTCAGTTGGCAGAGCACAAGCTTCCCAAGCTTGGGGTCGCGGGTTCGAAC
CCCGTTGCCCGCTCCA
Downstream region at tRNA end position 
taccgcaagg
Secondary structure (Cloverleaf model)
>WENV170690195	Gly	CCC
                   a      TCCA taccgcaagg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T + G
                     G + T          C A
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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