The detailed information of tRNA gene sequence


Sequence ID>WENV170690219
Genome IDLFRM01331089
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 177
End posion on genome 253
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
tctagaaggt
tRNA gene sequence 
GCGCCGGTAGCTCAACTGGATAGAGCATCGGACTACGGATCCGAAGGTTGGGGGTTCAAG
TCCTCTCCGGCGCGCCA
Downstream region at tRNA end position 
tgatttaaaa
Secondary structure (Cloverleaf model)
>WENV170690219	Arg	ACG
                   t      GCCA tgatttaaaa
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T C T C C     A
      C A A        A      + | + | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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