The detailed information of tRNA gene sequence


Sequence ID>WENV170690240
Genome IDLFRM01332085
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1089
End posion on genome 1179
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaatattttt
tRNA gene sequence 
GGAGAGATGACCGAGAGGCTGAAGGTGGTGGTCTCGAAAACCACTGTGCAAGTTTCTTGC
ACCGGGGGTTCAAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tatatcaaca
Secondary structure (Cloverleaf model)
>WENV170690240	Ser	CGA
                   t      GCCA tatatcaaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | + | | |     A
    G       G C C A       G G G G G     C
    G         | | |                 T T
    C       A G G T
      T G A        G     TGTGCAAGTTTCTTGCACC
                    G - C
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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