The detailed information of tRNA gene sequence


Sequence ID>WENV170690247
Genome IDLFRM01332603
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 250
End posion on genome 325
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
taaatatcgc
tRNA gene sequence 
GGGAATATGGCTCAGTTGGTAGAGCAATTGACTGTTAATCAATGGGTCACAGGTTCGAGT
CCTGTTATTCCCGCCA
Downstream region at tRNA end position 
atatgctggt
Secondary structure (Cloverleaf model)
>WENV170690247	Asn	GTT
                   c      GCCA atatgctggt
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A
                     A - T          T G
                    T     T G T C C     A
      T G A        G      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    A - T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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