The detailed information of tRNA gene sequence


Sequence ID>WENV170690255
Genome IDLFRM01332603
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 952
End posion on genome 1040
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caccaagtac
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTTAAGGAGCTGGTCTTGAAAACCAGTGATGCTTAACGGCAC
CGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
aatgcccaga
Secondary structure (Cloverleaf model)
>WENV170690255	Ser	TGA
                   c      GCCA aatgcccaga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        G     TGATGCTTAACGGCACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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