The detailed information of tRNA gene sequence


Sequence ID>WENV170690315
Genome IDLFRM01335353
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2229
End posion on genome 2155
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
accacttggt
tRNA gene sequence 
GCGGACGTGGCTCAGCGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGGGTTCAAATC
CCGTCGTCCGCTCCA
Downstream region at tRNA end position 
tttctatctt
Secondary structure (Cloverleaf model)
>WENV170690315	Gly	GCC
                   t      TCCA tttctatctt
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G C C C     A
        G A        G      + | | | |     A
      C     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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