The detailed information of tRNA gene sequence


Sequence ID>WENV170690345
Genome IDLFRM01336425
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 413
End posion on genome 488
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
catttaatgt
tRNA gene sequence 
GGGGGTGTAGCTCAGCTGGGAGAGCACCTGCCTTGCAAGCAGGGGGTCAGCGGTTCGATT
CCGCTCATCTCCACCA
Downstream region at tRNA end position 
ttaaagtaaa
Secondary structure (Cloverleaf model)
>WENV170690345	Ala	TGC
                   t      ACCA ttaaagtaaa
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     G - C          T T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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