The detailed information of tRNA gene sequence


Sequence ID>WENV170690347
Genome IDLFRM01336640
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 355
End posion on genome 431
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ccggttcatc
tRNA gene sequence 
GGGCGTGTAGCTCAGTTGGTTAGAGCGCGTCCCTGATAAGGACGAGGTCCCTGGTTCGAC
TCCAGGCACGCCCACCA
Downstream region at tRNA end position 
ctggctcacc
Secondary structure (Cloverleaf model)
>WENV170690347	Ile	GAT
                   c      ACCA ctggctcacc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          T C
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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