The detailed information of tRNA gene sequence


Sequence ID>WENV170690357
Genome IDLFRM01337263
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 386
End posion on genome 460
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttttttgtaT
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGGAGAGCACCTGCCTTGCAAGCAGGGGGTCAGGAGTTCGAAT
CTCCTCATCTCCATtg
Downstream region at tRNA end position 
gcgaaagcca
Secondary structure (Cloverleaf model)
>WENV170690357	Ala	TGC
                   T      ATtg gcgaaagcca
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     G - C          T A
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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