The detailed information of tRNA gene sequence


Sequence ID>WENV170690393
Genome IDLFRM01339068
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 113777
End posion on genome 113702
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
acgtatattt
tRNA gene sequence 
GCCCCCATAGCTCAGTAGGCAGAGCGCATCCATGGTAAGGATGAGGTCACCAGTTCGATT
CTGGTTGGGGGCTCCA
Downstream region at tRNA end position 
gtgcgaaagc
Secondary structure (Cloverleaf model)
>WENV170690393	Thr	GGT
                   t      TCCA gtgcgaaagc
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     T G G T C     A
      T G A        A      | | | | |     G
    A       C T C G       A C C A G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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