The detailed information of tRNA gene sequence


Sequence ID>WENV170690403
Genome IDLFRM01339196
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 567
End posion on genome 492
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ggaatctctT
tRNA gene sequence 
GGGCCTATAGCTCAGCTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCGAG
TCCATTTAGGCCCATtc
Downstream region at tRNA end position 
cttttaagga
Secondary structure (Cloverleaf model)
>WENV170690403	Ile	GAT
                   T      ATtc cttttaagga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     T T A C C     A
      C G A        A      + | | | |     G
    T       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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