The detailed information of tRNA gene sequence


Sequence ID>WENV170690421
Genome IDLFRM01340838
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 238
End posion on genome 162
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
tgcaaagtac
tRNA gene sequence 
GCGCTTGTAGCTCAGTTGGATAGAGCACTTGGCTACGAACTAAGGGGTCGGGAGTTCGAA
TCTCTCCAAGCGCACCA
Downstream region at tRNA end position 
tttgcatact
Secondary structure (Cloverleaf model)
>WENV170690421	Arg	ACG
                   c      ACCA tttgcatact
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G + T
                    G - C
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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