The detailed information of tRNA gene sequence


Sequence ID>WENV170690425
Genome IDLFRM01340942
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 443
End posion on genome 519
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaggctctct
tRNA gene sequence 
GGCGGGATAGCTCAGCTGGCTAGAGCGTACGACTCATAATCGTAAGGTCAAGAGTTCGAG
TCTCTTTCTCGCTACTA
Downstream region at tRNA end position 
aggtcgggga
Secondary structure (Cloverleaf model)
>WENV170690425	Met	CAT
                   t      ACTA aggtcgggga
                     G + T
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     A - T          T G
                    T     T T C T C     A
      C G A        A      | | | | |     G
    T       C T C G       A A G A G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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