The detailed information of tRNA gene sequence


Sequence ID>WENV170690490
Genome IDLFRM01344229
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 5417
End posion on genome 5493
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
actgtagggg
tRNA gene sequence 
GGCCCGGTAGTTCAGTTGGTTAGAACGCTAGCCTGTCACGCTAGAGGCCGAGGGTTCGAG
TCCCTTCCGGGTCGCCA
Downstream region at tRNA end position 
gttataagcc
Secondary structure (Cloverleaf model)
>WENV170690490	Asp	GTC
                   g      GCCA gttataagcc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G A G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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