The detailed information of tRNA gene sequence


Sequence ID>WENV170690505
Genome IDLFRM01345438
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 39571
End posion on genome 39481
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttctggactt
tRNA gene sequence 
GGAGGGGTGTCCGAGTGGTTTAAGGAGCTGGTCTTGAAAACCAGTGACTCACGTAAGTGG
GCCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
cggtcaatat
Secondary structure (Cloverleaf model)
>WENV170690505	Ser	TGA
                   t      GCCA cggtcaatat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        G     TGACTCACGTAAGTGGGCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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