The detailed information of tRNA gene sequence


Sequence ID>WENV170690532
Genome IDLFRM01346691
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3162
End posion on genome 3238
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ccttgcctgt
tRNA gene sequence 
GGGCTTGTAGCTCAGGTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGAAGTTCAAG
TCTTCCCAGGCCCACCA
Downstream region at tRNA end position 
tgaaaagtgg
Secondary structure (Cloverleaf model)
>WENV170690532	Ile	GAT
                   t      ACCA tgaaaagtgg
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     C C T T C     A
      G G A        A      | | | | |     A
    T       C T C G       G G A A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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