The detailed information of tRNA gene sequence


Sequence ID>WENV170690533
Genome IDLFRM01346691
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3247
End posion on genome 3322
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
catgaaaagt
tRNA gene sequence 
GGGGGTGTAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCATCAGTTCGATC
CTGTTCACCTCCACCA
Downstream region at tRNA end position 
ctttttttaa
Secondary structure (Cloverleaf model)
>WENV170690533	Ala	TGC
                   t      ACCA ctttttttaa
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     G - C          C T
                    T     T T G T C     A
      C G A        A      |   | | |     G
    T       C T C G       A T C A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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