The detailed information of tRNA gene sequence


Sequence ID>WENV170690544
Genome IDLFRM01347332
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 264
End posion on genome 339
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cggattttat
tRNA gene sequence 
TCCTCAATAGCTCAGCTGGTAGAGCATGCGGCTGTTAACCGCAGGGTCGTAGGTTCGAGT
CCTACTTGAGGAGCCA
Downstream region at tRNA end position 
gttggtacct
Secondary structure (Cloverleaf model)
>WENV170690544	Asn	GTT
                   t      GCCA gttggtacct
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T
                     A - T          T G
                    T     C A T C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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