The detailed information of tRNA gene sequence


Sequence ID>WENV170690587
Genome IDLFRM01349340
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 7726
End posion on genome 7653
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
tcccgaccat
tRNA gene sequence 
GCAGGCGTAGTTTAATGGCAGAACTTCAGCCTTCCAAGCTGATCGTGAGGGTTCGATTCC
CTTCGCCTGCTCCA
Downstream region at tRNA end position 
aatgaaattt
Secondary structure (Cloverleaf model)
>WENV170690587	Gly	TCC
                   t      TCCA aatgaaattt
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T T
                    T     T T C C C     A
        A A        A      + | | | |     G
      T     T T T G       G A G G G     C
      G     + | | |                 T T
      G     G A A C
        C A        T     TCGT
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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