The detailed information of tRNA gene sequence


Sequence ID>WENV170690588
Genome IDLFRM01349340
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2134
End posion on genome 2044
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
attagcattt
tRNA gene sequence 
GGAGGAATACCCAAGAGGCTGAAGGGGCTGGCTTGGAAAGCTAGTAGATCGGTAACACGG
TGCGGGGGTTCGAATCCCCCTTCCTCCGCCA
Downstream region at tRNA end position 
taattaaaaa
Secondary structure (Cloverleaf model)
>WENV170690588	Ser	GGA
                   t      GCCA taattaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C C C C C     A
      A G A        A      | | | | |     G
    G       A C C C       G G G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TAGATCGGTAACACGGTGC
                    C - G
                    T - A
                    G + T
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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