The detailed information of tRNA gene sequence


Sequence ID>WENV170690610
Genome IDLFRM01351246
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 11840
End posion on genome 11764
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtttattctT
tRNA gene sequence 
GGGCCCGTAGCTTAGTCCGGTCAGAGCGCCCGGCTCATAACCGGGCGGTCGTGGGTTCAA
ATCCCTCCGGGCCCATtt
Downstream region at tRNA end position 
ctacttgagg
Secondary structure (Cloverleaf model)
>WENV170690610	Met	CAT
                   T      ATtt ctacttgagg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C C C     A
    C T G A        A      |   | | |     A
  C         T T C G       G T G G G     C
  G         + | | |                 T T
  G         G A G C
    T C A          G     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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