The detailed information of tRNA gene sequence


Sequence ID>WENV170690621
Genome IDLFRM01352650
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 4551
End posion on genome 4626
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
aatctttcac
tRNA gene sequence 
GGCCAGGTAGCTCAGTCGGTAGAGCAGAGGATTGAAAATCCTTGTGTCGGCAGTTCGATT
CTGCCCCAGGCCACCA
Downstream region at tRNA end position 
tgaatttgct
Secondary structure (Cloverleaf model)
>WENV170690621	Phe	GAA
                   c      ACCA tgaatttgct
                     G - C
                     G - C
                     C - G
                     C - G
                     A   A
                     G - C
                     G - C          T T
                    T     C C G T C     A
      T G A        A      | | | | |     G
    C       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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