The detailed information of tRNA gene sequence


Sequence ID>WENV170690633
Genome IDLFRM01353287
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 816
End posion on genome 888
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cccactatat
tRNA gene sequence 
GCCGATGTGGCTCAATTGGCAGAGCAGCTGATTTGTAATCAGCAGGTTAACGGTTCGAGT
CCGTTCATCGGCTttt
Downstream region at tRNA end position 
ataacaaata
Secondary structure (Cloverleaf model)
>WENV170690633	Thr	TGT
                   t      Tttt ataacaaata
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T T G C C     A
      T A A        G      | | | | |     G
    T       C T C G       A A C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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