The detailed information of tRNA gene sequence


Sequence ID>WENV170690636
Genome IDLFRM01353287
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1097
End posion on genome 1172
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
tgctttgtac
tRNA gene sequence 
GCCCAGTTAGCTCAGTTGGTAGAGCAGTGGACTGAAAATCCACGTGTCTCTGGTTCGATT
CCGGAACTGGGCACGA
Downstream region at tRNA end position 
tcggaaactc
Secondary structure (Cloverleaf model)
>WENV170690636	Phe	GAA
                   c      ACGA tcggaaactc
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     T - A          T T
                    T     A G G C C     A
      T G A        A      | | + | |     G
    T       C T C G       T C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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