The detailed information of tRNA gene sequence


Sequence ID>WENV170690666
Genome IDLFRM01355320
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 4
End posion on genome 80
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
nnnnnnnaat
tRNA gene sequence 
GGCCCGTTGGTGAAGCGGTTTAACACACATGCCTTTCACGCATGCATACACGGGTTCGAA
TCCCGTACGGGTCACCA
Downstream region at tRNA end position 
ttaaaaaagt
Secondary structure (Cloverleaf model)
>WENV170690666	Glu	TTC
                   t      ACCA ttaaaaaagt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T G C C C     A
      C G A        G      | | | | |     G
    G       A G T G       A C G G G     C
    G         | | |                 T T
    T       A C A C
      T T A        A     CATAC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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