The detailed information of tRNA gene sequence


Sequence ID>WENV170690667
Genome IDLFRM01355320
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 91
End posion on genome 166
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ttaaaaaagt
tRNA gene sequence 
GGAGGATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGAGC
CCGTCATCCTCCACCA
Downstream region at tRNA end position 
tataaatgcc
Secondary structure (Cloverleaf model)
>WENV170690667	Val	TAC
                   t      ACCA tataaatgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          C G
                    T     C T G C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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