The detailed information of tRNA gene sequence


Sequence ID>WENV170690671
Genome IDLFRM01355320
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 429
End posion on genome 504
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
agccaatgat
tRNA gene sequence 
GTCCTGCTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCAGAGGTTCGAGT
CCTCTGCAGGACACCA
Downstream region at tRNA end position 
ttttagaaaa
Secondary structure (Cloverleaf model)
>WENV170690671	Lys	TTT
                   t      ACCA ttttagaaaa
                     G - C
                     T - A
                     C - G
                     C - G
                     T - A
                     G - C
                     C - G          T G
                    T     T C T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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