The detailed information of tRNA gene sequence


Sequence ID>WENV170690715
Genome IDLFRM01357865
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 223
End posion on genome 135
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttgccccaaa
tRNA gene sequence 
GGAGAGATGCTCGAGTGGTTGAAGAGGCACGCCTGGAAAGCGTGTATACGCCTAAAGCGT
ATCGCGGGTTCGAATCCCGCTTTCTCCGCtt
Downstream region at tRNA end position 
aatttattaa
Secondary structure (Cloverleaf model)
>WENV170690715	Ser	GGA
                   a      GCtt aatttattaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     A - T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C T C       G C G G G     C
    G         | | |                 T T
    T       A G A G
      T G A        G     TATACGCCTAAAGCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK