The detailed information of tRNA gene sequence


Sequence ID>WENV170690732
Genome IDLFRM01358951
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 327
End posion on genome 402
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
atatctcagt
tRNA gene sequence 
GCCGCCTTAGCTCAGTCGGTAGAGCGATTCACTCGTAATGAATAGGTCATCGGTTCGATT
CCGATAGGCGGCTCCG
Downstream region at tRNA end position 
acaagaagac
Secondary structure (Cloverleaf model)
>WENV170690732	Thr	CGT
                   t      TCCG acaagaagac
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A          T T
                    T     T A G C C     A
      T G A        A      | | | | |     G
    C       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    T - A
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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