The detailed information of tRNA gene sequence


Sequence ID>WENV170690748
Genome IDLFRM01359274
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 486
End posion on genome 399
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcgtgcacgt
tRNA gene sequence 
GGATGATTCGCCTAGTGGCCTATGGCGCACGCTTGGAAAGCGTGTTGGTGTAACAGCCTC
GCGAGTTCGAATCTCGCATCCTCCGCCA
Downstream region at tRNA end position 
ccaagccccg
Secondary structure (Cloverleaf model)
>WENV170690748	Ser	GGA
                   t      GCCA ccaagccccg
                     G - C
                     G - C
                     A - T
                     T   C
                     G - C
                     A - T
                     T - A          T A
                    T     C G C T C     A
      T G A        C      | | | | |     G
    G       T C C G       G C G A G     C
    G         | | |                 T T
    C       T G G C
      C T A        G     TTGGTGTAACAGCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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