The detailed information of tRNA gene sequence


Sequence ID>WENV170690767
Genome IDLFRM01360145
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 7142
End posion on genome 7217
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aagaagataa
tRNA gene sequence 
AGGGGCATAGCTCAGCTGGCAGAGCAGCGGTCTCCAAAACCGCGTGCCGAGGGTTCGAGT
CCTTCTGCCCCTGCCA
Downstream region at tRNA end position 
agacttgcca
Secondary structure (Cloverleaf model)
>WENV170690767	Trp	CCA
                   a      GCCA agacttgcca
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T G
                    T     C T T C C     A
      C G A        A      | | + | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GTGCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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